

7 hr(s), 55 mins
Manila to Kota Kinabalu Flight Guide: Your Complete Travel Resource
Planning a trip from Manila to Kota Kinabalu? This vibrant Malaysian destination on the island of Borneo offers stunning landscapes, rich cultural experiences, and unforgettable adventures just a short flight from the Philippines. Whether you're traveling for business or leisure, this comprehensive guide provides everything you need to know about flying from Manila to Kota Kinabalu, including direct flights, connecting options, airport information, and travel tips to ensure a smooth journey.
Philippines AirAsia offers direct flights from Manila to Kota Kinabalu, making it one of the most convenient options for travelers. The flight typically takes around 2 hours and 10 minutes, covering approximately 1,098 kilometers between the two cities. Philippines AirAsia operates multiple flights per week, with both morning and evening departure options available. The airline utilizes the Airbus A320 aircraft for this route, providing comfortable seating and essential in-flight services. For budget-conscious travelers, this direct route often offers competitive pricing, with tickets starting as low as $60 during promotional periods.
Jeju Air provides another direct flight option between Manila and Kota Kinabalu. With an average flight duration of 5 hours and 10 minutes, this service operates using Boeing 737 and Boeing 737MAX 8 Passenger aircraft. While the flight time is longer than Philippines AirAsia's service, Jeju Air often provides alternative scheduling options that may better suit certain travel plans. The airline offers standard amenities on board, including comfortable seating and basic in-flight services. Departure times vary throughout the week, providing flexibility for travelers with specific schedule requirements.
China Southern Airlines offers a connecting flight option from Manila to Kota Kinabalu via Guangzhou. The first leg from Manila to Guangzhou is operated on an Airbus A320neo, while the second leg from Guangzhou to Kota Kinabalu typically uses an Airbus A321neo. With a total journey time of approximately 10 hours, including a 4h 20m layover at Guangzhou Baiyun International Airport, this route provides an opportunity to briefly experience another destination during your journey. The layover in Guangzhou offers access to duty-free shopping, dining options, and relaxation areas within the modern terminal facilities.
Malaysia Airlines provides a connecting service through Kuala Lumpur, with a total journey time of 7 hours and 25 minutes. Both flight segments utilize Boeing 737 aircraft, offering consistent service throughout your journey. The relatively short layover of just 1 hour at Kuala Lumpur International Airport makes this an efficient option for travelers who prefer a connecting flight but don't want to spend excessive time in transit. This routing can also be cost-effective during certain times of the year, and the domestic connection within Malaysia often means smoother transfer procedures.
For travelers interested in an extended stopover experience, Jeju Air offers a connection through Incheon, South Korea. With a total journey time of 24 hours and 10 minutes, including a substantial 14h 40m overnight layover at Incheon International Airport, this option provides an opportunity to briefly explore Seoul during your transit. Both flight segments operate on Boeing 737 or Boeing 737MAX 8 Passenger aircraft. The overnight layover may require accommodation arrangements, but it creates a unique opportunity to experience two destinations in a single trip.
Information about schedule and airline subject to change based on airline policy. Please check regularly at Traveloka App.
Ninoy Aquino International Airport (NAIA) is located approximately 7 kilometers south of Manila's city center in Pasay City, bordering Parañaque City. As the Philippines' primary gateway, this international airport serves the Greater Manila Area and the surrounding regions. Its strategic location provides convenient access to various parts of Metro Manila, including the business districts of Makati and Bonifacio Global City, as well as popular tourist areas like Manila Bay and Intramuros.
NAIA consists of four terminals, each serving different airlines and destinations:
For flights to Kota Kinabalu, passengers typically depart from Terminal 3 when flying with Philippines AirAsia. Each terminal offers check-in counters, immigration facilities, security screening areas, and various amenities for departing passengers.
Multiple transportation options are available to reach NAIA from Manila's city center:
It's recommended to allow extra travel time due to Manila's unpredictable traffic conditions, especially during peak hours.
NAIA offers a comprehensive range of facilities across its terminals:
Kota Kinabalu International Airport (BKI) is located approximately 7 kilometers southwest of Kota Kinabalu city center in the state of Sabah, Malaysia. As the second-busiest airport in Malaysia, it serves as the main gateway to Sabah and the island of Borneo. The airport's proximity to the city center makes it highly accessible for travelers, with a travel time of about 20 minutes to reach downtown Kota Kinabalu.
Kota Kinabalu International Airport features two main terminals:
Terminal 1, where passengers from Manila will arrive, is designed for efficiency with clear signage in multiple languages, making navigation straightforward for international travelers. The immigration and customs processes are generally smooth and well-organized.
Several transportation options connect the airport to Kota Kinabalu city center:
Kota Kinabalu International Airport offers a comprehensive range of amenities for travelers:
Direct flights from Manila to Kota Kinabalu typically take around 2 hours and 10 minutes. The flight time may vary slightly depending on weather conditions and the specific airline operating the service.
Philippines AirAsia is the primary carrier offering direct flights on this route. Cebu Pacific and other airlines may also operate direct services depending on the season and schedule adjustments.
The flight distance between Manila and Kota Kinabalu is approximately 1,098 kilometers (682 miles).
According to historical data, the lowest prices for Manila to Kota Kinabalu flights can generally be found on Tuesdays, Wednesdays, and Saturdays. Booking 1-3 months in advance can also help secure better rates.
Filipino citizens need a valid passport with at least six months validity beyond their intended stay. While Malaysia offers visa-free entry for Filipinos for stays up to 30 days, it's always advisable to check the latest visa requirements before traveling.
Baggage allowances vary by airline and fare type. Philippines AirAsia typically offers 20kg checked baggage for premium fares, with options to purchase additional allowance. Carry-on allowances are usually limited to one item weighing 7kg.
For international flights departing from Manila, it's recommended to arrive at the airport at least 3 hours before your scheduled departure time to allow sufficient time for check-in, immigration, and security procedures.
COVID-19 travel requirements are subject to change. As of May 2025, most restrictions have been lifted, but it's essential to check the latest health protocols and entry requirements before traveling.
While flying is the most practical way to travel between Manila and Kota Kinabalu, some adventurous travelers might consider these alternative routes:
Sea Travel - Ferry and Multiple Connections
This complex journey involves multiple segments:
Combined Air and Sea Travel
- Flight from Manila to Zamboanga City (approximately 1 hour 30 minutes)
- Ferry from Zamboanga to Sandakan (about 13-15 hours)
- Bus or car from Sandakan to Kota Kinabalu (approximately 6 hours)
Total journey time: Approximately 22-24 hours plus waiting times
These alternative routes are significantly more time-consuming and complex than direct flights, which remain the most efficient option by far. They might appeal to travelers seeking an adventure or those with specific interest in experiencing multiple destinations along the way.
Mount Kinabalu
Malaysia's first UNESCO World Heritage Site and the highest peak in Borneo at 4,095 meters. Adventure seekers can embark on a challenging climb to the summit, while nature enthusiasts can explore the diverse ecosystems and unique flora and fauna in Kinabalu Park.
Tunku Abdul Rahman Marine Park
A cluster of five islands (Gaya, Manukan, Sapi, Mamutik, and Sulug) offering pristine beaches, crystal-clear waters, and vibrant coral reefs. Perfect for snorkeling, diving, and island-hopping adventures just 15-20 minutes by boat from Kota Kinabalu.
Kota Kinabalu City Mosque
Also known as the Floating Mosque, this architectural marvel sits on a man-made lagoon with spectacular views, especially during sunset. Its grand design combines contemporary and Islamic architectural elements, making it one of the city's most photographed landmarks.
Filipino Market and Handicraft Market
Located along the waterfront, these vibrant markets offer a colorful array of local handicrafts, souvenirs, fresh seafood, and tropical fruits. The evening atmosphere transforms the area into a lively night market with food stalls serving fresh seafood and local delicacies.
Monsopiad Cultural Village
Located about 30 minutes from the city center, this living museum preserves the heritage of the indigenous Kadazan people. Visitors can learn about traditional customs, witness cultural performances, and view historical artifacts including the infamous collection of human skulls from the headhunting era.
Hinava
A traditional Kadazan-Dusun dish of raw fish marinated in lime juice, bird's eye chilies, ginger, and bitter gourd. Similar to ceviche, this refreshing appetizer showcases the fresh seafood available in Sabah's waters.
Ngiu Chap
A hearty beef noodle soup unique to Sabah, featuring various beef parts including tendon, tripe, and meat slices served with either yellow noodles or rice vermicelli in a flavorful broth, garnished with fresh herbs and chili.
Sang Nyuk Mee
A popular pork noodle dish originating from the Chinese communities in Sabah. It features blanched pork slices served with either dry noodles tossed in soy sauce or in a clear, savory broth, typically accompanied by a bowl of pork offal soup.
Tuaran Mee
A specialty fried noodle dish from the town of Tuaran, featuring egg noodles that are first fried until crispy, then stir-fried with egg, vegetables, and meat or seafood, creating a unique texture and flavor profile not found elsewhere in Malaysia.
Ambuyat
A traditional starchy dish made from the interior trunk of the sago palm. This neutral-tasting gooey substance is eaten by twirling it around bamboo chopsticks (candas) and dipping it into various spicy and sour accompaniments, particularly fish-based sauces.
Kota Kinabalu offers a unique culinary experience that reflects its diverse cultural influences from indigenous communities, Chinese settlers, and the broader Malay archipelago. The city's position on the coast ensures an abundance of fresh seafood, while the agricultural interior provides a wealth of tropical produce, creating a distinctive food scene that's worth exploring during your visit.
Flight Duration | 7 hr(s) 55 mins |
Airport in Manila | |
Airport in Kota Kinabalu |
